Brightway Flows 1.0
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By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
prefLabel 3 bootstrap_labels, flow_layers.pubchem_element_enrichment, normalize_name_case element name from the flow object: Radium
altLabel 2 chebi_altlabels, consensus_match group_key=radium||dimension=Resource > media=Ground; cas=7440-14-4; added Common Chemistry CAS names as altLabel: MeSH ID: D011883; object_uuid=fo-611748cc803ce39c
cas_match_labels 1 consensus_match group_key=radium||dimension=Resource > media=Ground; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-14-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-611748cc803ce39c: {'7440-14-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 231-122-4 from CAS 7440-14-4
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7440-14-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33325']; candidate_pubchem_cids=[6328144, 101943088]; selected_pubchem_cids=[6328144]; formula_similarity_expected=['Ra']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
11,669 bootstrap_labels prefLabel [{"@value":"radium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… Bootstrapped prefLabel from legacy name field
11,670 bootstrap_labels name radium Purged legacy name field to enforce prefLabel usage
11,671 bootstrap_labels synonyms ["226Ra","88Ra","AC1O3H04","Actinium-X","RADIUM-226","Radium 226,228","Radium, isotope of mass 226","Radium, radioactiv… [] Removed legacy synonyms field in favor of structured labels
45,217 default_context_mapping context {"dimension":"Resource","media":"Ground"} Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
45,218 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/reso-grou Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
217,212 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,804 normalize_name_case prefLabel [{"@value":"radium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… [{"@value":"Radium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,948 ec_cross_check ec_numbers [] ["231-122-4"] Resolved from EC-inventory: 231-122-4 from CAS 7440-14-4
238,294 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ra"],"atte… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
238,295 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
238,296 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.028.293","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['7440-14-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33325']; candidate_pubchem_cids=[6328144, 101943088]; selected_pubchem_cids=[6328144]; formula_similarity_expected=['Ra']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,516 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ra"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ra"],"atte… rdkit_pre_consensus from '[Ra]'; added: monoisotopic_mass
256,007 chebi_altlabels altLabel [] [{"@value":"88Ra","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
271,283 consensus_match altLabel [{"@value":"88Ra","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"88Ra","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… group_key=radium||dimension=Resource > media=Ground; cas=7440-14-4; added Common Chemistry CAS names as altLabel: MeSH ID: D011883; object_uuid=fo-611748cc803ce39c
271,284 consensus_match cas_match_labels {"7440-14-4":"exactMatch"} group_key=radium||dimension=Resource > media=Ground; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-14-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-611748cc803ce39c: {'7440-14-4': 'exactMatch'}
276,698 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ra"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ra"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Radium'
283,326 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ra"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ra"],"atte… rdkit_post_consensus from '[Ra]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
303,673 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/0d7a61e8-6556-… associations resolved on the elementary layer
391,078 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ra"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ra"],"atte… typed the way the ontology types it
398,943 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
398,944 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ra"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ra"],"atte… the substance's answer, copied onto its flow
403,831 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Radium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consens… [{"@value":"Radium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enrichme… element name from the flow object: Radium

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260920T1042228874600000/11669 prefLabel ef:agent/bootstrap_labels ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v0 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260920T1042228874600000/11670 name ef:agent/bootstrap_labels ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v1 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260920T1042228874600000/11671 synonyms ef:agent/bootstrap_labels ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v2 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260920T1042228874600000/45217 context ef:agent/default_context_mapping ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v3 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260920T1042228874600000/45218 context_iri ef:agent/default_context_mapping ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v4 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260920T1042228874600000/217212 unit_iri ef:agent/unit_normalization ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v5 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260920T1042228874600000/223804 prefLabel ef:agent/normalize_name_case ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v6 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260920T1042228874600000/226948 ec_numbers ef:agent/ec_cross_check ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v7 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260920T1042228874600000/238294 properties ef:agent/enrich_references ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v8 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260920T1042228874600000/238295 skos_definition ef:agent/enrich_references ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v9 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260920T1042228874600000/238296 references ef:agent/enrich_references ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v10 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260920T1042228874600000/251516 properties ef:agent/rdkit_pre_consensus ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v11 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260920T1042228874600000/256007 altLabel ef:agent/chebi_altlabels ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v12 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260920T1042228874600000/271283 altLabel ef:agent/consensus_match ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v13 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260920T1042228874600000/271284 cas_match_labels ef:agent/consensus_match ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v14 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260920T1042228874600000/276698 properties ef:agent/opsin_iupac ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v15 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260920T1042228874600000/283326 properties ef:agent/rdkit_post_consensus ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v16 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260920T1042228874600000/303673 concept_associations ef:agent/carry_associations_onto_flows ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v17 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260920T1042228874600000/391078 properties ef:agent/normalise_property_values ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v18 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v19
ef:activity/change/20260920T1042228874600000/398943 types ef:agent/link_flows_to_their_substance ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v19 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v20
ef:activity/change/20260920T1042228874600000/398944 properties ef:agent/link_flows_to_their_substance ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v20 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v21
ef:activity/change/20260920T1042228874600000/403831 prefLabel ef:agent/flow_layers.pubchem_element_enrichment ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v21 ef:flow/0d7a61e8-6556-11dd-ad8b-0800200c9a66/v22

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