Thorium
Everything that changed this flow. Back to the flow
38b2bfa6-50e8-4eee-973f-0e3e64ffa630
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 2 | bootstrap_labels, flow_layers.pubchem_element_enrichment | element name from the flow object: Thorium |
| cas_match_labels | 1 | consensus_match | group_key=thorium||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-29-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1fe0b0d0552af544: {'7440-29-1': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| ec_numbers | 1 | ec_cross_check | Resolved from EC-inventory: 231-139-7 from CAS 7440-29-1 |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['7440-29-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33385']; candidate_pubchem_cids=[23960, 11817119]; selected_pubchem_cids=[23960]; formula_similarity_expected=['Th']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 19,151 | bootstrap_labels | prefLabel | — | [{"@value":"Thorium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Bootstrapped prefLabel from legacy name field |
| 19,152 | bootstrap_labels | name | Thorium | — | Purged legacy name field to enforce prefLabel usage |
| 74,299 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 74,300 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 219,584 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 227,032 | ec_cross_check | ec_numbers | [] | ["231-139-7"] | Resolved from EC-inventory: 231-139-7 from CAS 7440-29-1 |
| 245,010 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 245,011 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 245,012 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J261.499E","provenance":{"prov:wasGeneratedBy":"enrich_referen… | Added references with provenance; cas_numbers=['7440-29-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33385']; candidate_pubchem_cids=[23960, 11817119]; selected_pubchem_cids=[23960]; formula_similarity_expected=['Th']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 253,459 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | rdkit_pre_consensus from '[Th]'; added: monoisotopic_mass |
| 256,884 | chebi_altlabels | altLabel | [] | [{"@value":"90Th","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… | Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 272,618 | consensus_match | altLabel | [{"@value":"90Th","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… | [{"@value":"90Th","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… | group_key=thorium||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=7440-29-1; added Common Chemistry CAS names as altLabel: <sup>232</sup>Th, MeSH ID: D013910, Thorium-232; object_uuid=fo-1fe0b0d0552af544 |
| 272,619 | consensus_match | cas_match_labels | — | {"7440-29-1":"exactMatch"} | group_key=thorium||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-29-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1fe0b0d0552af544: {'7440-29-1': 'exactMatch'} |
| 278,672 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Thorium' |
| 285,452 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | rdkit_post_consensus from '[Th]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 293,030 | dedupe_altlabels | altLabel | [{"@value":"90Th","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… | [{"@value":"90Th","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… | Deduplicated altLabel values and removed entries matching prefLabel |
| 318,203 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/38b2bfa6-50e8-… | associations resolved on the elementary layer |
| 393,064 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | typed the way the ontology types it |
| 401,821 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/ChemicalElement"] | the substance's answer, copied onto its flow |
| 401,822 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Th"],"atte… | the substance's answer, copied onto its flow |
| 403,847 | flow_layers.pubchem_element_enrichment | prefLabel | [{"@value":"Thorium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | [{"@value":"Thorium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enrichm… | element name from the flow object: Thorium |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260920T1042228874600000/19151 | prefLabel | ef:agent/bootstrap_labels | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v0 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v1 |
| ef:activity/change/20260920T1042228874600000/19152 | name | ef:agent/bootstrap_labels | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v1 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v2 |
| ef:activity/change/20260920T1042228874600000/74299 | context | ef:agent/default_context_mapping | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v2 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v3 |
| ef:activity/change/20260920T1042228874600000/74300 | context_iri | ef:agent/default_context_mapping | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v3 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v4 |
| ef:activity/change/20260920T1042228874600000/219584 | unit_iri | ef:agent/unit_normalization | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v4 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v5 |
| ef:activity/change/20260920T1042228874600000/227032 | ec_numbers | ef:agent/ec_cross_check | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v5 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v6 |
| ef:activity/change/20260920T1042228874600000/245010 | properties | ef:agent/enrich_references | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v6 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v7 |
| ef:activity/change/20260920T1042228874600000/245011 | skos_definition | ef:agent/enrich_references | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v7 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v8 |
| ef:activity/change/20260920T1042228874600000/245012 | references | ef:agent/enrich_references | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v8 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v9 |
| ef:activity/change/20260920T1042228874600000/253459 | properties | ef:agent/rdkit_pre_consensus | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v9 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v10 |
| ef:activity/change/20260920T1042228874600000/256884 | altLabel | ef:agent/chebi_altlabels | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v10 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v11 |
| ef:activity/change/20260920T1042228874600000/272618 | altLabel | ef:agent/consensus_match | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v11 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v12 |
| ef:activity/change/20260920T1042228874600000/272619 | cas_match_labels | ef:agent/consensus_match | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v12 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v13 |
| ef:activity/change/20260920T1042228874600000/278672 | properties | ef:agent/opsin_iupac | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v13 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v14 |
| ef:activity/change/20260920T1042228874600000/285452 | properties | ef:agent/rdkit_post_consensus | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v14 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v15 |
| ef:activity/change/20260920T1042228874600000/293030 | altLabel | ef:agent/dedupe_altlabels | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v15 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v16 |
| ef:activity/change/20260920T1042228874600000/318203 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v16 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v17 |
| ef:activity/change/20260920T1042228874600000/393064 | properties | ef:agent/normalise_property_values | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v17 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v18 |
| ef:activity/change/20260920T1042228874600000/401821 | types | ef:agent/link_flows_to_their_substance | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v18 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v19 |
| ef:activity/change/20260920T1042228874600000/401822 | properties | ef:agent/link_flows_to_their_substance | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v19 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v20 |
| ef:activity/change/20260920T1042228874600000/403847 | prefLabel | ef:agent/flow_layers.pubchem_element_enrichment | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v20 | ef:flow/38b2bfa6-50e8-4eee-973f-0e3e64ffa630/v21 |